PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G079600.1
Common NamePHAVU_007G079600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family Trihelix
Protein Properties Length: 451aa    MW: 51421.2 Da    PI: 6.741
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G079600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix82.84.5e-26120216183
            trihelix   1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsesss 77 
                         +Wt+++v++Li+a+++++e++  +              +kk++W++vsk+m+erg+++sp+qC++k+++lnkrykk++++ +++ ++++++
  Phvul.007G079600.1 120 KWTDKMVKLLITAVSYIGEDVTGDGggsgsgrrkfavlQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVE 210
                         7**************99999996534556678889999**********************************************5588888 PP

            trihelix  78 tcpyfd 83 
                         + +++d
  Phvul.007G079600.1 211 KPALLD 216
                         777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-23118245No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MEGNLPQGGI IQGGTSFGGF NLPGSIRVQH QAQHPHTMHQ HQSHPRQGSS VHSTVHDVFP  60
LTMGTLQNCD QTISMTEFSK GDRSKNSASE EDEPSFTEDG VDCHHEAGRG KKGSPWQRVK  120
WTDKMVKLLI TAVSYIGEDV TGDGGGSGSG RRKFAVLQKK GKWKSVSKVM AERGYHVSPQ  180
QCEDKFNDLN KRYKKLNDML GRGTSCQVVE KPALLDVIDF LSDKEKDDVR KILSSKHLFY  240
EEMCSYHNGN RLHLPHDPAL QRSLQLALRN RDDHDNDDMR RSHHDDQGED DPDVEIDDHD  300
DFEENCTSHG DSRGIHAPLG GSMKKPKQGQ DQEDCNTFGN SLNCQDYNRS SYPHGQMVQS  360
DVNQGLPESM RSAWLQKQWV ESRFLQLEEQ KLQIQVEMLE LEKQRFKWQR FSKKKDRELE  420
KLSLENERLK LENERLALEL KRKELSTGFK *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G079600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007143533.10.0hypothetical protein PHAVU_007G079600g
RefseqXP_007143534.10.0hypothetical protein PHAVU_007G079600g
TrEMBLV7BF510.0V7BF51_PHAVU; Uncharacterized protein
STRINGXP_007143533.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50013157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-148sequence-specific DNA binding transcription factors