PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G081000.1
Common NamePHAVU_007G081000g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 241aa    MW: 26920.5 Da    PI: 6.1394
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G081000.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.33.9e-14158215360
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                         + +r+rr++kNRe+A rsR+RK+a++ eLe  + +Le+eN++L ke  e kke +k  
  Phvul.007G081000.1 158 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKERYKQL 215
                         679**************************************98776655555555433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-11154216No hitNo description
SMARTSM003381.0E-8156218IPR004827Basic-leucine zipper domain
PfamPF001708.9E-13158217IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.864158210IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.46E-8160211No hitNo description
CDDcd147078.16E-17160206No hitNo description
PROSITE patternPS000360163178IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MASSKLMASS HSRKSESSSP SPTPQFTTTN FIPISDAAVT AAPKTVDDVW REIVAGDRRE  60
CKEEAPDDEM MTLEDFLAKA GAVNDDDNEE VDCDIKMPMP LTERLGSGVF AFDPLLAATP  120
FQDGVEGSVI GFGNGLEVVE GGRGKRARPV LEQLDKAAQQ RQRRMIKNRE SAARSRERKQ  180
AYQVELESLA VKLEEENDKL LKEKAERKKE RYKQLMEKVL PIAQKQRPPC TLRRARSLQW  240
*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G081000.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007143550.11e-176hypothetical protein PHAVU_007G081000g
SwissprotP427775e-58GBF4_ARATH; G-box-binding factor 4
TrEMBLV7BCH81e-175V7BCH8_PHAVU; Uncharacterized protein
STRINGXP_007143550.11e-176(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.17e-54bZIP family protein