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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Phvul.007G090700.1 |
| Common Name | PHAVU_007G090700g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
GRAS |
| Protein Properties |
Length: 462aa MW: 52594.8 Da PI: 6.3723 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.007G090700.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 299.8 | 7e-92 | 81 | 459 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
l++lLl+ A+av++++l + L+ l +++s +gd++qR++ayf+ +Laarl+ s ++ l +t+ +ee+ a++ ++ vsP++
Phvul.007G090700.1 81 LIHLLLSTATAVDDNNLDSSLENLTDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFFDVLMEDPTT----EEEFLAFTDLYRVSPYF 167
689****************************************************999999999888886....677888899******** PP
GRAS 92 kfshltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelg.v 174
+f+h+taNqaIlea+e+e +++H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ + +el+et++rL +f + +g +
Phvul.007G090700.1 168 QFAHFTANQAILEAFEREeernnRALHVIDFDVSYGFQWPSLIQSLSEKAttGNRISLRITGFGK----NLKELQETESRLVSFSKGFGsL 254
****************9987777789***********************9866677*********....99****************9768 PP
GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyys 265
fef+ l l ++ +Lr k++E++aVnlv l +l + + ++++L +v sl P +vv+veqe +++ sFl rf+++l+y++
Phvul.007G090700.1 255 VFEFQGL----LRGSRVINLRKKKNETVAVNLVSYLNTLS----CFMK-ISDTLGFVHSLHPSIVVLVEQEGSRSPRSFLSRFTDSLHYFA 336
9*****8....77778899***************999997....3333.578*************************************** PP
GRAS 266 alfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkv........ksd 347
a+fdsl+ lp +s er +E++llg+ei++++ + + e++e+W++r+e+ GF + ++s+k + qaklll++ +++
Phvul.007G090700.1 337 AMFDSLDDCLPLDSAERFRIEKKLLGKEIKSLLNSDVDGvDCPKYERMETWKARMENHGFVATKISSKSMIQAKLLLKMRthycplqfEEE 427
*********************************988776457899********************************98522222211222 PP
GRAS 348 g...yrveee.sgslv.lgWkdrpLvsvSaWr 374
g +rv e+ +g ++ lgW++r L++vSaW+
Phvul.007G090700.1 428 GgggFRVSERdEGRAIsLGWQNRFLLTVSAWQ 459
23348887664555557**************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 462 aa
Download sequence Send
to blast |
MEDSEEDELL NLSLSVAADR EKKKKGKIIR EHSVSMSSTT GRKSYERYEG KIFRLLEMRE 60
QMVREEHRRK GVVEDGNGLP LIHLLLSTAT AVDDNNLDSS LENLTDLYQT VSLTGDSVQR 120
VVAYFADGLA ARLLTRKSPF FDVLMEDPTT EEEFLAFTDL YRVSPYFQFA HFTANQAILE 180
AFEREEERNN RALHVIDFDV SYGFQWPSLI QSLSEKATTG NRISLRITGF GKNLKELQET 240
ESRLVSFSKG FGSLVFEFQG LLRGSRVINL RKKKNETVAV NLVSYLNTLS CFMKISDTLG 300
FVHSLHPSIV VLVEQEGSRS PRSFLSRFTD SLHYFAAMFD SLDDCLPLDS AERFRIEKKL 360
LGKEIKSLLN SDVDGVDCPK YERMETWKAR MENHGFVATK ISSKSMIQAK LLLKMRTHYC 420
PLQFEEEGGG GFRVSERDEG RAISLGWQNR FLLTVSAWQS V*
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| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
