PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G100300.1
Common NamePHAVU_007G100300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 506aa    MW: 55476.5 Da    PI: 6.7421
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G100300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000524024341855
                         HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +++  L++++ +      +K + a++L +A+ YIk Lq
  Phvul.007G100300.1 402 DKITALQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 434
                         7888889988887.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.642384433IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-9399449IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-8399441IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.41E-4402438No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MTEESAGNTV AASITPLNWW YLQANSISSW NDTNNTWNNQ QNPNSSSSCE EDISVSTSFT  60
NASNHSSLTV ESSRRLIDPP APSSNELMGE HASDNQLWSH VLSGVGSNGE LHSSQEIGEN  120
FLGALSSKSM TSTMFQPVCD YLKKLDHTSW EYSGSTSLNS YEKHLNGFSE AMIENNESLT  180
KLSNLVSTCS IAPPDPEVNS HFDPQTNNIS LNSSMDNFPQ SDHFKQPFGD STCSLGGVAN  240
RNSGVFPCYD HDMKIKQEFH AGEVQGSVYG KSLNANGYQH GFNGLSVGDS CKLYHGMPNL  300
PSCTRNFSDV ISFNSRFGRP VIGIHAQKPS MKFLNVSEPK KQGLQAPSPI RTNINGKGEG  360
TTREVKKKRS EESSDAMLKK PKQDTSTASS SKVQAPKVKL GDKITALQQI VSPFGKTDTA  420
SVLFEAIGYI KFLQEQVQLL SNPYLKANSH KDPWGSLDRK DKDDTKLDLR SRGLCLVPTS  480
CTPLVYRESS GPDYWTPAYR GCLYR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G100300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007143772.10.0hypothetical protein PHAVU_007G100300g
TrEMBLV7BH210.0V7BH21_PHAVU; Uncharacterized protein
STRINGXP_007143772.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.12e-52bHLH family protein