PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G222500.1
Common NamePHAVU_007G222500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ERF
Protein Properties Length: 192aa    MW: 21805.8 Da    PI: 9.968
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G222500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.37.8e-131767155
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        + y+GVr++k  g+Wv+e r p  n+k++r +lg+f  +++Aa a + a+++++g
  Phvul.007G222500.1 17 PVYRGVRQRK--GKWVCEFRQP--NKKNARLWLGTFSRPDMAAVAFDVAALAFKG 67
                        68****9987..******5554..4478**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.1E-91766IPR001471AP2/ERF domain
PROSITE profilePS5103219.231875IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-161876IPR016177DNA-binding domain
SMARTSM003801.9E-221881IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.8E-261876IPR001471AP2/ERF domain
CDDcd000184.71E-221977No hitNo description
PRINTSPR003672.9E-61930IPR001471AP2/ERF domain
PRINTSPR003672.9E-65777IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MQKRKAGRKK FQETRHPVYR GVRQRKGKWV CEFRQPNKKN ARLWLGTFSR PDMAAVAFDV  60
AALAFKGDRA SLNFPEAISF LPRLNSGTSS VRTIQFAATQ TAEKLLSCTE FQKLRDDVSS  120
RGGSGNFFWN EDCLKLASDE SSRRFFWDEE EVFNMPELLN SMAEALIIAP PALQKGFNWV  180
DGETTVDLTL W*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-131987669ATERF1
3gcc_A2e-131987669ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G222500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145241.11e-140hypothetical protein PHAVU_007G222500g
TrEMBLV7BJL71e-139V7BJL7_PHAVU; Uncharacterized protein
STRINGXP_007145241.11e-139(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-33C-repeat/DRE binding factor 2