PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Phvul.007G258600.1

Common Name

PHAVU_007G258600g

Organism

Phaseolus vulgaris

Taxonomic ID

3885

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus

Family

G2-like

Protein Properties

Length: 158aa MW: 17341.2 Da PI: 5.1401

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Phvul.007G258600.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	26.8	1.2e-08	121	142	4	25
G2-like 4 lrWtpeLHerFveaveqLGGse 25 ++Wt++LHe Fv av+ LGG++ Phvul.007G258600.1 121 IKWTKDLHELFVAAVNCLGGAQ 142 79******************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.0E-7	116	147	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence Send to blast
MHYASQELNG VHSSVANVGV SEKNGFNFQH HEKDLFDVPA SCLNFDSQNM MCESSGDQSA 60 PLFGSVVDSF FSSHGDTFCE LYEHFRNKQN DILEGDASAP VNRVGDSSSS MVPIATRKKG 120 IKWTKDLHEL FVAAVNCLGG AQSNFKSFQF DFLTFLN*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Phvul.007G258600.1

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015041	3e-78	AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007145672.1	1e-114	hypothetical protein PHAVU_007G258600g
TrEMBL	V7BM76	1e-112	V7BM76_PHAVU; Uncharacterized protein
STRING	XP_007145672.1	1e-113	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF18701	4	6

Link Out ? help Back to Top
Phytozome	Phvul.007G258600.1
Entrez Gene	18627068