PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G159200.2
Common NamePHAVU_008G159200g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family NAC
Protein Properties Length: 311aa    MW: 35237.1 Da    PI: 4.845
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G159200.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.67e-211311336128
                 NAM  36 evdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkg 116
                         + +i++++P++L+  +k++ +  +fF+++ ++yatg+rk+r+         ++ +W++tgk+k++++ +g  +g kk++v++  +++  k+
  Phvul.008G159200.2  13 DQGICYTHPENLQ-GAKKDGSYFHFFHRTINAYATGQRKRRKihhqqgvtEEHWRWHKTGKTKAIIE-NGICKGFKKIMVLHvrSKSGFKP 101
                         4579********8.556777889******************85666666333556************.999***********554455567 PP

                 NAM 117 ektdWvmheyrl 128
                          k++Wvmh+y+l
  Phvul.008G159200.2 102 YKSNWVMHQYHL 113
                         7*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.1531132IPR003441NAC domain
SuperFamilySSF1019419.29E-2413132IPR003441NAC domain
PfamPF023657.6E-721113IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MFINEFITTL EGDQGICYTH PENLQGAKKD GSYFHFFHRT INAYATGQRK RRKIHHQQGV  60
TEEHWRWHKT GKTKAIIENG ICKGFKKIMV LHVRSKSGFK PYKSNWVMHQ YHLGTEEDEK  120
EGEYVVSKIF YQQQKKTEKN EDNPMVEDPD NIVSRTGPRT PKPNPPNPPR AGNSADCDDY  180
IDETVPLPSA QDTKAILGES LAPISDNHDL DSSAWLAGES QAVEHIEYDG LDDILLCKEI  240
LDSSALLNDS GLDSSNLYDL AFYDNQMARN DNESCGISVL DTLELDTPDF DLSNFNFCSQ  300
DSILQWMGRL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G159200.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007141005.10.0hypothetical protein PHAVU_008G159200g
TrEMBLV7B5A40.0V7B5A4_PHAVU; Uncharacterized protein
STRINGXP_007141004.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-51NAC domain containing protein 73