PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G169000.1
Common NamePHAVU_008G169000g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 370aa    MW: 41753.5 Da    PI: 6.8532
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G169000.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-1175112238
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee.kvkeL 38 
                         +++k+ rr ++NReAAr++R+RKka++++Le+ +vk +
  Phvul.008G169000.1  75 ADSKVLRRQAQNREAARKCRLRKKAYVQQLETsRVKLM 112
                         5789**************************97244443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-770122No hitNo description
SMARTSM003385.8E-473134IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.7676111IPR004827Basic-leucine zipper domain
PfamPF001701.3E-877126IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.2E-779120No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
PfamPF141448.2E-28166239IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MNSSSTQLVL AKRMGIYDPF HQVNMWGDTF KIDGSLNSIA TPMFMTKSSM QNKSECTPHE  60
SREPSGDDQE TNEKADSKVL RRQAQNREAA RKCRLRKKAY VQQLETSRVK LMQLELEIEK  120
AKKQSMYIRS APDLSYMGSS GTINPGIALF ELEYGQWIEE LCRQNEELRN ALQTRESDMQ  180
LHLLVESCLS HYSNLFRMKA EAAKADVFYL ISGAWKASVE RLFLWIGGSR PSQLLNIIVP  240
QLEPLTDQQI VSINNLRLSS QQAEDALSLG LDKLQQSLVH NIPSDPLVIG HYGFEMAAAM  300
DKGEALEGFV NQADHLRQQT LLYMSRILTT GQAAQGLLAM GEYFHRLRTL SSLWTAHSCD  360
PSFPTHFSN*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G169000.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0917830.0BT091783.1 Soybean clone JCVI-FLGm-8F18 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007141120.10.0hypothetical protein PHAVU_008G169000g
SwissprotQ93ZE21e-134TGA7_ARATH; Transcription factor TGA7
TrEMBLV7B5L00.0V7B5L0_PHAVU; Uncharacterized protein
STRINGXP_007141120.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-136bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]