PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G181500.1
Common NamePHAVU_008G181500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 238aa    MW: 26315.9 Da    PI: 8.5883
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G181500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.56.5e-154794254
                        HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        +++h e+ErrRR+riNs +++Lr+llP+a      K +Ka+ L ++ve++k L
  Phvul.008G181500.1 47 CKSHREAERRRRQRINSHLSTLRSLLPNA-----AKSDKASLLAEVVEHVKRL 94
                        789*************************8.....7****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.9994594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-124794IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-134897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-1448100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-1151100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.74E-55897No hitNo description
Gene3DG3DSA:3.30.70.2607.7E-4139206No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MLPFRRFYGF QSWLDHDSTH LPNSLIKRAV EFDGARSKTE RKSTEACKSH REAERRRRQR  60
INSHLSTLRS LLPNAAKSDK ASLLAEVVEH VKRLRKQAND VACVDGDEPG AVQSEAWPLP  120
GECDEATVSL CEGEARRVKA TVCCEDRAGL NRDVTWAIRS VRAKPIRAEM MTVGGRTKSV  180
VVVEWGEEEV EEGREVGALE RALKAVVENR ALVGFGMGPV VLGQKRGRDS CGSPSYC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G181500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150361e-162AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007141266.11e-173hypothetical protein PHAVU_008G181500g
TrEMBLV7B6R41e-172V7B6R4_PHAVU; Uncharacterized protein
STRINGXP_007141266.11e-173(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF114412834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-29bHLH family protein