PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G251700.1
Common NamePHAVU_008G251700g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 330aa    MW: 37426.9 Da    PI: 6.9683
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G251700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.61.1e-22217273360
                         -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                         DgynW+KY  K+ kg+e+  sYYrCt+++C +kkkv+r+  d+k+vei+Y+g+H h+k
  Phvul.008G251700.1 217 DGYNWKKYEDKVGKGNENRVSYYRCTHPNCYAKKKVDRTI-DGKIVEIHYQGNHAHPK 273
                         9***************************************.***************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081118.292210274IPR003657WRKY domain
SuperFamilySSF1182902.22E-18214274IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-20214274IPR003657WRKY domain
SMARTSM007745.3E-19215273IPR003657WRKY domain
PfamPF031068.2E-17217272IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005794Cellular ComponentGolgi apparatus
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MSLRNFNPLE QKSLCRVVGF ISSVIGLICY AFSSSFNHLF GEWNFLKIIL YTMVSFSISS  60
IVLFLKKWKR SRCFSLKVHA GVLVLLLTSF YSFVSDKSAN GKPNGLSLIS CGAFALMSLC  120
LSRQINLGFG ADLLNFFLGC LTVQLMEINL MLFIVAAILC YCFMILRSKE SESEIETVPM  180
EDHVTIELGT ADGGEREADD NNGFGYQQIP LLRMEGDGYN WKKYEDKVGK GNENRVSYYR  240
CTHPNCYAKK KVDRTIDGKI VEIHYQGNHA HPKPLNNMKR NSSSEYLYSL LTSDSDTTDL  300
PDQSFASQSN EQLDYDVQFW RTHQYPHDI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G251700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007142089.10.0hypothetical protein PHAVU_008G251700g
TrEMBLV7BB490.0V7BB49_PHAVU; Uncharacterized protein
STRINGXP_007142089.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF147431012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.16e-20WRKY DNA-binding protein 33