PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G258900.1
Common NamePHAVU_008G258900g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 180aa    MW: 20893.8 Da    PI: 9.979
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G258900.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.4e-1067110952
                         CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                         r  +NR +ArrsR+RK+a+ie Le+  k+ e + + L  ++ e 
  Phvul.008G258900.1  67 RIVSNRHSARRSRLRKLAYIEDLENALKSYERKKDILHGQIAEQ 110
                         6789***************************9999998666544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.003854128IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-866117No hitNo description
PfamPF077168.4E-767112IPR004827Basic-leucine zipper domain
PROSITE patternPS0003606781IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-867113No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MGEVKIPTLI KPIPLRPQKP SYPLHKLPTI PENDHILTEE NSVNGDHNTS NEAQPNIEQE  60
QGNNFNRIVS NRHSARRSRL RKLAYIEDLE NALKSYERKK DILHGQIAEQ RKKQLVLEIE  120
HHTLKFHVAA REKQRILQEV EIEKNRAEVD RMLEMQRRMV NFTSLQLITN SNFNPSALA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17581RRSRLRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G258900.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150362e-43AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007142180.11e-128hypothetical protein PHAVU_008G258900g
TrEMBLV7B8P21e-127V7B8P2_PHAVU; Uncharacterized protein
STRINGXP_007142180.11e-127(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1738133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.26e-12bZIP family protein