PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Phvul.009G018700.1

Common Name

PHAVU_009G018700g

Organism

Phaseolus vulgaris

Taxonomic ID

3885

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus

Family

bZIP

Protein Properties

Length: 173aa MW: 18919.8 Da PI: 9.5166

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Phvul.009G018700.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.7	7.2e-15	98	148	3	53
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +++r r +kNRe+A rsR+RK+a+ Le +++ L++eN++L+k+l+el+ Phvul.009G018700.1 98 QDQRHVRIMKNRESAVRSRARKQAYRRGLEAEIARLTEENSRLRKQLKELQ 148 6899****************************************8888775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.2E-12	92	152	No hit	No description
SMART	SM00338	6.1E-10	96	160	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.691	98	148	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.1E-11	98	148	IPR004827	Basic-leucine zipper domain
CDD	cd14707	6.21E-20	100	154	No hit	No description
SuperFamily	SSF57959	1.94E-10	101	149	No hit	No description
PROSITE pattern	PS00036	0	104	118	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence Send to blast
MASSPCDCWT HLSQSLSSSS SSPSSSSLPQ TLLPPPPSSS SEHVWNDIKL PSLSNSPVDF 60 NPSSSHSSLL SLSSSHNHHS LLSVSNASFP SNQTTHHQDQ RHVRIMKNRE SAVRSRARKQ 120 AYRRGLEAEI ARLTEENSRL RKQLKELQCS LSSSENTPDR ISAPCRTSSS PF*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Phvul.009G018700.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007136110.1	1e-116	hypothetical protein PHAVU_009G018700g
TrEMBL	V7AR98	1e-115	V7AR98_PHAVU; Uncharacterized protein
STRING	XP_007136110.1	1e-115	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF16339	7	9

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	4e-14	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	Phvul.009G018700.1
Entrez Gene	18618856