PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G036300.1
Common NamePHAVU_009G036300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family MYB_related
Protein Properties Length: 587aa    MW: 63770.7 Da    PI: 8.542
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G036300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.1e-09202247144
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 
                         r+ W++eEd +l  av+++G g+W+t a+  +   +R++ q+  rw
  Phvul.009G036300.1 202 RKTWSEEEDIQLRAAVQRWGEGNWATMAKGDNfpIKRSPTQLAQRW 247
                         789*************************987788669999999999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.707197255IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.4E-11198252IPR009057Homeodomain-like
SuperFamilySSF466891.87E-10200253IPR009057Homeodomain-like
SMARTSM007177.5E-10201253IPR001005SANT/Myb domain
PfamPF002491.2E-8202247IPR001005SANT/Myb domain
CDDcd116607.24E-11203252No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MSEKKNKVSY TEKDAVALMQ RYDPTTVFIL LQEVAHYAKP KIDWNELVKK SATGISNVRE  60
YQMLWRHLAY RHSLPEDFEV GAEPLDDDSD LECELEALPP VSGESASEAA ACVKVMIASR  120
TLSESAPSSS TIEAPLTINI PVCHSSRTLI ESSQPSNLMQ GTNIVFPVTV QRQTLPTHPA  180
PSTDGIESKG LVGGNLASKR KRKTWSEEED IQLRAAVQRW GEGNWATMAK GDNFPIKRSP  240
TQLAQRWSIL RKKDGTVNSG TISTSTQYTT AEQLATRHSL SLALDMPLKK LTAPGVSDPV  300
KTSISVKNQM QNRNMVEKVV TSFVPPQQSS QHPSLLGSSD PYVKPKLVDE KLVPKGNIIS  360
NPVLKSTTAA SGTRTDPPSN PPSNTVSQFK MAPVKHSEDA KPAVSSLTKP SISANLPSDL  420
KNKPVPPLAD KVTWKQGVNS TKEFRAFDPT SAPKETPKET TQKEPPKVTI GSQINNNLDK  480
GRLDTGQGKI KPISSGEAGL KDKANPVTDE KSAIKANAEV YEDEGSVKNA SDNSKLDKES  540
LTFNEDKKHS INESSNNQTI NDKNVNLSLQ DEDSQSAKVV KTDGGC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G036300.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007136328.10.0hypothetical protein PHAVU_009G036300g
TrEMBLV7ARP00.0V7ARP0_PHAVU; Uncharacterized protein
STRINGXP_007136328.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.17e-63MYB_related family protein