PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G138600.2
Common NamePHAVU_009G138600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 192aa    MW: 21729.8 Da    PI: 10.3022
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G138600.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY38.91.7e-12158181124
                         ---SS-EEEEEEE--TT-SS-EEE CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsY 24 
                         ldDgy+WrKYGqK+vk++++pr+Y
  Phvul.009G138600.2 158 LDDGYKWRKYGQKVVKNTQHPRNY 181
                         59*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-14143181IPR003657WRKY domain
SuperFamilySSF1182903.79E-11150181IPR003657WRKY domain
PROSITE profilePS5081114.504153191IPR003657WRKY domain
SMARTSM007740.0029158186IPR003657WRKY domain
PfamPF031061.4E-8159182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1901141Biological Processregulation of lignin biosynthetic process
GO:1904369Biological Processpositive regulation of sclerenchyma cell differentiation
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MMSTTSQTSL NHSLFEEQDQ IPTQMGFNIP FPSNQAFPPL GCHQSLKSIS AVVPSLSSEP  60
ASSAPNFAET LFSTAVQRPR EDLTSSLVGG GGQLLSLNRS RVNPWAWEEV SDCLMSKRMG  120
DDNRHLGVSA MKMKKMKGRR KVREPRFCFK TMSEVDVLDD GYKWRKYGQK VVKNTQHPRN  180
YLLLFRWRTE K*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G138600.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-118AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007137584.11e-142hypothetical protein PHAVU_009G138600g
TrEMBLV7AY821e-141V7AY82_PHAVU; Uncharacterized protein
STRINGXP_007137585.11e-132(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.17e-21WRKY DNA-binding protein 13