PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G179600.1
Common NamePHAVU_009G179600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 192aa    MW: 21991.7 Da    PI: 10.1621
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G179600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.3e-091868654
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHH CS
                 HLH  6 nerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksL 54
                        + +Er+RR +++s  ++L +l+P++ k+p+ K  l   + L +A +YIk++
  Phvul.009G179600.1 18 KTIERNRRIHMKSLCHQLGSLIPPNLKPPKSKlmLGQQDQLDLAARYIKHM 68
                        689*********************6678888867888899**********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.15E-41073No hitNo description
PROSITE profilePS508889.891268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.3E-91693IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-91686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-61868IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00311874IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MKRRLASASD DSTKLDRKTI ERNRRIHMKS LCHQLGSLIP PNLKPPKSKL MLGQQDQLDL  60
AARYIKHMRE RIEKLKRQKE KAMSNQSSDR KMLDKNVDTK LPVLELRDLG SGIEVMLVSG  120
LNKTFMLYEV INVLEEEGAE VVTASFSTVG DKIFYVVHAQ VKISRVGVET TRVRDRLQEF  180
IAPLEMWPED M*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G179600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-109AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007138091.11e-139hypothetical protein PHAVU_009G179600g
TrEMBLV7AXR41e-138V7AXR4_PHAVU; Uncharacterized protein
STRINGXP_007138091.11e-138(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68492141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-26bHLH family protein