PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G183600.1
Common NamePHAVU_009G183600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 228aa    MW: 25162.2 Da    PI: 7.7647
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G183600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.2e-1199146455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k + Ka +L + ++YI+sLq
  Phvul.009G183600.1  99 SHSLAERARREKISERMKILQDLVPGC----NKVNGKALVLDEIINYIQSLQ 146
                         8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.59E-1193150No hitNo description
SuperFamilySSF474594.06E-1893165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.83495145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-1895165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-899146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-10101151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MDPPLITDST FSPAYTLSDI WLRTPPFPPS DHHFSKSNSG SNKRMKVEGS SVENDGFKAE  60
AETSSVSGNK SSEQSTIPCE APKQEYIHVR ARRGQATDSH SLAERARREK ISERMKILQD  120
LVPGCNKVNG KALVLDEIIN YIQSLQRQVE FLSMKLEAVN SRMNMSPTID GLPLKDVGGT  180
PRFDIAGMVF GSQAARGYAQ GSHHGWLHMQ IGGGLRDQHN SEKSHWE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G183600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0908470.0BT090847.1 Soybean clone JCVI-FLGm-5B17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007138141.11e-171hypothetical protein PHAVU_009G183600g
SwissprotQ69WS32e-70BH094_ORYSJ; Transcription factor BHLH094
TrEMBLV7AXZ41e-170V7AXZ4_PHAVU; Uncharacterized protein
STRINGXP_007138141.11e-170(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-66BIG PETAL P