PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G183600.2
Common NamePHAVU_009G183600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 182aa    MW: 20189.8 Da    PI: 8.2307
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G183600.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.2e-1199146455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k + Ka +L + ++YI+sLq
  Phvul.009G183600.2  99 SHSLAERARREKISERMKILQDLVPGC----NKVNGKALVLDEIINYIQSLQ 146
                         8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.23E-1093150No hitNo description
SuperFamilySSF474592.49E-1893165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.83495145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-1995166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.5E-999146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-10101151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MDPPLITDST FSPAYTLSDI WLRTPPFPPS DHHFSKSNSG SNKRMKVEGS SVENDGFKAE  60
AETSSVSGNK SSEQSTIPCE APKQEYIHVR ARRGQATDSH SLAERARREK ISERMKILQD  120
LVPGCNKVNG KALVLDEIIN YIQSLQRQVE FLSMKLEAVN SRMNMSPTID GLPLKDLTKL  180
N*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G183600.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-84AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007138142.11e-133hypothetical protein PHAVU_009G183600g
SwissprotQ69WS37e-57BH094_ORYSJ; Transcription factor BHLH094
TrEMBLV7B1201e-132V7B120_PHAVU; Uncharacterized protein
STRINGXP_007138141.11e-128(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.16e-56BIG PETAL P