PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G188800.1
Common NamePHAVU_009G188800g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 96aa    MW: 10916.6 Da    PI: 9.3761
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G188800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.95.7e-0617631655
                        HHHHHHHHHCTSCCC..........TTS-STCHHHHHHHHHHHHHHH CS
                 HLH 16 iNsafeeLrellPkas.......kapskKlsKaeiLekAveYIksLq 55
                        iN+ + +L+ llPk+          ++  +s ++i ++++ +I++Lq
  Phvul.009G188800.1 17 INDLMMRLQALLPKLNqrsdsrvLHTKASVSMMQIIKETCSHISMLQ 63
                        9*************666****98888888*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.85E-61680IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-51776IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
MSGRRNSRTS KFTESGINDL MMRLQALLPK LNQRSDSRVL HTKASVSMMQ IIKETCSHIS  60
MLQREVKEHG ERLAELVNSA YTSDVDEECL RKLHL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G188800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-55AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007138199.14e-64hypothetical protein PHAVU_009G188800g
TrEMBLV7B0038e-63V7B003_PHAVU; Uncharacterized protein
STRINGXP_007138199.11e-63(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106242439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.14e-11activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1