PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G195200.2
Common NamePHAVU_009G195200g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 474aa    MW: 51933.2 Da    PI: 8.2566
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G195200.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.33.7e-24162218259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk ++ +++ ++v+ei+Y+++H h+
  Phvul.009G195200.2 162 SDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCCAKK-IKFCDHSGHVIEIVYKSQHSHD 218
                         7********************************98.999999***************7 PP
2WRKY92.92.3e-29335392259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dgy+WrKYGqK vkgs++ r+YYrCtsagCpv+k++e++ +++k+++itY+g H+h+
  Phvul.009G195200.2 335 SDGYRWRKYGQKLVKGSPHFRNYYRCTSAGCPVRKHIETAVDNTKALIITYKGVHDHD 392
                         7********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.8E-21155220IPR003657WRKY domain
PROSITE profilePS5081117.442156220IPR003657WRKY domain
SuperFamilySSF1182903.92E-20157220IPR003657WRKY domain
SMARTSM007741.8E-22161219IPR003657WRKY domain
PfamPF031063.9E-17163218IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-30319394IPR003657WRKY domain
PROSITE profilePS5081130.607329394IPR003657WRKY domain
SuperFamilySSF1182907.32E-26329394IPR003657WRKY domain
SMARTSM007744.5E-33334393IPR003657WRKY domain
PfamPF031061.3E-22336391IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MEEEEATQQR LTDSSLTTHS LTSTASDEEL LHSETLLLHS SDLPHHNAAH MQRSSTAREI  60
GLDESKESAQ HSDEETIVKE TVEAPQKQTE NQLQMSVCST SLSKLSPTSV SQYLSSAPGP  120
IVPEQRPSPP KANNVKVAKV DKGSPSGGTT LSSVSVTRAS ASDGYNWRKY GQKQVKSPTG  180
SRSYYRCTHS NCCAKKIKFC DHSGHVIEIV YKSQHSHDPP HKIDSTKECK FLPYSEPKMK  240
CSVPKQSSRV RNDSDPSSSP KEPLYESPCS AKRNLENSSN GEKGKVFLKE AHVNDPEPKK  300
RLNKGDDLTC LDSAIKPGKK PKFVVHAAED MGISSDGYRW RKYGQKLVKG SPHFRNYYRC  360
TSAGCPVRKH IETAVDNTKA LIITYKGVHD HDMPVPKKRH GPPSASLVAA AAPASMNNLQ  420
LKRTGLIQNQ EISAQCSEDT EGELTGEALD LEGEKAIESA RTLLSIGFEI KPC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-26322394274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G195200.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007138280.10.0hypothetical protein PHAVU_009G195200g
SwissprotP595831e-118WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLV7AXI20.0V7AXI2_PHAVU; Uncharacterized protein
STRINGXP_007138279.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-108WRKY DNA-binding protein 32