PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Phvul.009G204300.1

Common Name

PHAVU_009G204300g

Organism

Phaseolus vulgaris

Taxonomic ID

3885

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus

Family

bZIP

Protein Properties

Length: 189aa MW: 21495.9 Da PI: 8.0543

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Phvul.009G204300.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.2	1.3e-11	99	156	6	63
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 r +r+ +NRe+ArrsR Kk++ie L+ + L++ N++L +++ l + ++ +++ Phvul.009G204300.1 99 RKKRMFSNRESARRSRMQKKQQIESLQCHLDHLQTLNRQLSEKIIYLLECNQQILQHN 156 89****************************************9987777777666655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.0E-9	93	158	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.14	96	145	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	2.4E-10	97	143	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.0E-9	99	153	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.7E-11	99	154	No hit	No description
CDD	cd14702	1.68E-11	99	147	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence Send to blast
MEGNEAKRLG GPPNFSTLTQ HSSFLSPTQN STLNNETTEG HMRYRDCIFT HVDSSQVLHH 60 IPLYCSRLHL SNNTNSPNTS SNSNNNNNAD EAIALLEDRK KRMFSNRESA RRSRMQKKQQ 120 IESLQCHLDH LQTLNRQLSE KIIYLLECNQ QILQHNAQLK DKVSYLQVAV SELLGPPGHV 180 DQSNHFPH*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Phvul.009G204300.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007138387.1	1e-138	hypothetical protein PHAVU_009G204300g
TrEMBL	V7B1P2	1e-136	V7B1P2_PHAVU; Uncharacterized protein
STRING	XP_007138387.1	1e-137	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13044	24	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	5e-25	basic leucine-zipper 70

Link Out ? help Back to Top
Phytozome	Phvul.009G204300.1
Entrez Gene	18620771