PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.010G057900.1
Common NamePHAVU_010G057900g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 286aa    MW: 32735.3 Da    PI: 6.1239
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.010G057900.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.45.9e-23112171359
                         -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         Dg++WrKYGqKe+ +++++r+YYrCt++   +C+++k+v+r +edp + ++tY g+H+++
  Phvul.010G057900.1 112 DGHHWRKYGQKEILKTKYSRNYYRCTHKydgNCQATKQVQRIQEDPPLYKTTYFGHHTCN 171
                         9***************************999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.2E-2397171IPR003657WRKY domain
PROSITE profilePS5081117.58105168IPR003657WRKY domain
SuperFamilySSF1182905.75E-22108171IPR003657WRKY domain
SMARTSM007743.2E-32110172IPR003657WRKY domain
PfamPF031065.6E-23112170IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MDHRKVQEEL VRGHEFATQL RLVINEKDDS ATTTPFVQTL AKNVLRSFTN TLFLLDKYYP  60
SHHLSNLVTP TKSEDSQESC KSFTSFKNRR GCYKRKRTTQ EWEKVSEAPA VDGHHWRKYG  120
QKEILKTKYS RNYYRCTHKY DGNCQATKQV QRIQEDPPLY KTTYFGHHTC NDLLNSEIIL  180
DSISSPSDTS ILLSFNNSFP TPTKQDCPFL SSSASLDPSP SFIKEERIPS SSSNDYMLSS  240
EPTLDDSSWH NNVTLPLDHW DVLSSALCDS SVDLDDINLL LDFDD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A5e-191121701068OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.010G057900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007134564.10.0hypothetical protein PHAVU_010G057900g
TrEMBLV7APM30.0V7APM3_PHAVU; Uncharacterized protein
STRINGXP_007134564.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-37WRKY DNA-binding protein 70