PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.010G070600.2
Common NamePHAVU_010G070600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 373aa    MW: 41462.4 Da    PI: 9.2268
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.010G070600.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.32.1e-16216263455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          hn+ ErrRRd+iN+++ eL++l+P++    sk  +Ka++L ++++Y+k+Lq
  Phvul.010G070600.2 216 VHNQSERRRRDKINQRMKELQKLVPNS----SKQTDKASMLDEVIQYMKQLQ 263
                         6*************************9....789*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088817.746212262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.3E-18213270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-18214277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-14216263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.41E-16217267No hitNo description
SMARTSM003533.3E-17218268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MSQRVPSCDV DDNTIPTPTK FSLLSTSNFT AHEVPKLVYK GACKKGQPLT PEDSPGRNQT  60
TWDIPRTSGT LESIVNHRIG KNCHKSVTKD ALVPCFPKQS TMFGACKKGY SMRVESGAGV  120
VARGPTTHEL SGGKDSNVSG SDTYPRELSV TFNSDTMGCP ENTCSSGKQC TDTTAIDDRD  180
SVSHRRSQSE AGEEDCKRSG VDRYCESNKR IKASAVHNQS ERRRRDKINQ RMKELQKLVP  240
NSSKQTDKAS MLDEVIQYMK QLQAHLQMMN WMKMYSSIML PIAMQQQQLK MSMIMTQMGI  300
GMRMSKEMTM NMNNINIPSI PPMLHLPPFM PVASCADQLL GEPPKSVTVD AYSKMAALYN  360
QMYHSPYSTS KK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220225ERRRRD
2221226RRRRDK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.010G070600.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-101AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007134725.10.0hypothetical protein PHAVU_010G070600g
TrEMBLV7AML00.0V7AML0_PHAVU; Uncharacterized protein
STRINGXP_007134726.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.12e-41bHLH family protein