PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.010G158400.1
Common NamePHAVU_010G158400g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 311aa    MW: 34548.6 Da    PI: 5.1278
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.010G158400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.4e-12130175555
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         h ++ErrRR+++ ++f  L   +P +      K +Ka++L+ A++Y+k+L+
  Phvul.010G158400.1 130 HIMAERRRRQELTERFIALSATIPGL-----SKTDKASVLRAAIDYVKQLK 175
                         999**********************8.....7*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.63E-17122195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.656125174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-17130191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-9130174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.72E-12130179No hitNo description
SMARTSM003538.9E-15131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MEEDSCNNNS HLHMEMDFFD NNDFDDFFSD IIFHQTPPPT PFSSGSESDH SFRASSFLPS  60
AAVNAAASKR SSPRTYILSF DNSTVVPATP EPSLPSSPLP AKRALHSQNP TTRPNQGSKR  120
SRTSSQTIDH IMAERRRRQE LTERFIALSA TIPGLSKTDK ASVLRAAIDY VKQLKEKVQE  180
LEKESRKSAE ETVILVNKSN PNGNEEITNS STETNCSILP EMEARVLGKE VLIEIHCEKE  240
YGVELKILDH LENLHLCVTG SSVLPFGNSA LCITITAQMD EERQMTVNEV VRNLREVLSV  300
SHLVSDSDPY *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.010G158400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-118AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007135787.10.0hypothetical protein PHAVU_010G158400g
TrEMBLV7AU870.0V7AU87_PHAVU; Uncharacterized protein
STRINGXP_007135787.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.23e-36bHLH family protein