PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.010G158600.1
Common NamePHAVU_010G158600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 353aa    MW: 39553.1 Da    PI: 7.5657
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.010G158600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.6e-10169213554
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         h + Er+RR+++ ++f  L   +P +     kK +Ka+iL +A+ Y+k L
  Phvul.010G158600.1 169 HIMTERKRRRELTERFIALSATIPGL-----KKIDKATILCEAITYVKRL 213
                         8999**********************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.814164213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-15168237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-7169213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.51E-9169218No hitNo description
Gene3DG3DSA:4.10.280.105.1E-15169229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-9170219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MFNESLFSAI PIPIYYPPFS SQTLHTNLHH SLPVLSFLLS SSLQMGEPCH KYWFSDMEIQ  60
DFDFFNQSHH KIESVDDEFL FSSQHAQEKP ATATTTTSPT AYILSFNDST VVAATCQTYG  120
GKQPYQEEVV VGSGGACLPS KGVSEKHYIE PKPNPATRKG RSSAETLDHI MTERKRRREL  180
TERFIALSAT IPGLKKIDKA TILCEAITYV KRLKERVREL EEQCKRTRVE SVSFVHQRSN  240
NGSDKGTTSS GAMKSDECYK TSEALPTVEA RVFKKDLLIR IHCKLQNGIL IKILDHLNTL  300
DLYTTSNSVM PFGSSTLDIS IVAQMGDKFN ATMNDLVKNL RLVLLQSCEV QQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173177RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.010G158600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-144AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007135790.10.0hypothetical protein PHAVU_010G158600g
TrEMBLV7AQF70.0V7AQF7_PHAVU; Uncharacterized protein
STRINGXP_007135790.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1625679
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.21e-26bHLH family protein