PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.010G158700.1
Common NamePHAVU_010G158700g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ERF
Protein Properties Length: 210aa    MW: 22802.9 Da    PI: 10.6389
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.010G158700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-2080130256
                 AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                          y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g+
  Phvul.010G158700.1  80 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRGA 130
                         69*******.**********32....25**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.50E-1579138No hitNo description
Gene3DG3DSA:3.30.730.101.4E-2980137IPR001471AP2/ERF domain
PROSITE profilePS5103222.62980137IPR001471AP2/ERF domain
PfamPF008472.2E-1480129IPR001471AP2/ERF domain
SMARTSM003803.4E-3280143IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-2280137IPR016177DNA-binding domain
PRINTSPR003677.2E-118192IPR001471AP2/ERF domain
PRINTSPR003677.2E-11103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MTMNHEIYLH ALTTTTANYF LAKSETAPSQ ALDSSQKLRY ETALEGIAAV VGEHVLFGTT  60
SSLHVPDTPK KTAGVSASKS YRGVRKRPWG RWSAEIRDRI GRCRHWLGTF DTAEEAARAY  120
DAAARRLRGA KARTNFKIPS VLPLSPSSEG GAVKPKAARN NARKCSSVEQ LFSGVPQTRG  180
NDYGGENKKV EVDLKLGVKF GVANTRIVI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1674136771Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.010G158700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-143AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007135791.11e-154hypothetical protein PHAVU_010G158700g
TrEMBLV7AR531e-153V7AR53_PHAVU; Uncharacterized protein
STRINGXP_007135791.11e-154(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130232631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.15e-26ERF family protein