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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Phvul.011G015000.1 |
| Common Name | PHAVU_011G015000g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
GRAS |
| Protein Properties |
Length: 417aa MW: 47468.1 Da PI: 7.982 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.011G015000.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 327.1 | 3.5e-100 | 11 | 415 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaa.rlarsvselykalppsetseknsseelaalklfsevsPil 91
++lL ecA++ +s+++ a+ +L +ls l+spdgd+mqR+a+yfteALa +++++ ++ k l+ +t ++ e+ + klf++ P+l
Phvul.011G015000.1 11 INLLKECATFTESENFIGADIALYHLSRLVSPDGDSMQRVATYFTEALACcQMTKNLRGVPKVLRLVRTL--STPEQQLVKKLFFDFYPFL 99
789*********************************************9637888999999999777766..3667778899********* PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
k++h ++Nq+I ea++ge+++ ++D++ s+ QW L+q+L +R ++p l+iT+ + +++ke le++g L+ Ae+l+ +fefn+ v
Phvul.011G015000.1 100 KIAHTVTNQTIIEAMQGETAINVLDLSPSNADQWTGLMQSLRERLTNTPYLKITVTAI--HEKKEVLEQMGLHLKVEAERLHFHFEFNA-V 187
*****************************************************98888..449**************************.7 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrll......................................desvsleserdevLklvksls 235
+++le+l++e+L +k+gE la+++vlqlh+ll ++ +++ + + +L+ +++l+
Phvul.011G015000.1 188 VSSLESLDPETLPIKKGEPLAISCVLQLHSLLaanddetvkmkgqrvfaemlvkqknkkvkpspdsalspFSPCPSH-KMECFLNGLWRLQ 277
99**************************************************************9999863333333.4777********* PP
GRAS 236 PkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkp 326
P+v+vv+eqe++ n++s+ er+++al++ys+lfd+lea+ +r+ r+ +E++llg+ei+n+vaceg er+erhe+le+W rle aGF+
Phvul.011G015000.1 278 PRVMVVTEQESNVNGSSLRERVSKALNFYSTLFDCLEASTSRTWVGRSLLEKMLLGEEIKNIVACEGVERKERHEKLETWIPRLELAGFGR 368
******************************************************************************************* PP
GRAS 327 vplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
vp+s++ a ll+ + y+++++++ l+++W++ pL+s+SaW+
Phvul.011G015000.1 369 VPISSNGIWLATKLLQSYV-PSYHIHHKNKFLFICWEKIPLFSISAWK 415
*****************99.66*************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MNWDEEGIRI INLLKECATF TESENFIGAD IALYHLSRLV SPDGDSMQRV ATYFTEALAC 60
CQMTKNLRGV PKVLRLVRTL STPEQQLVKK LFFDFYPFLK IAHTVTNQTI IEAMQGETAI 120
NVLDLSPSNA DQWTGLMQSL RERLTNTPYL KITVTAIHEK KEVLEQMGLH LKVEAERLHF 180
HFEFNAVVSS LESLDPETLP IKKGEPLAIS CVLQLHSLLA ANDDETVKMK GQRVFAEMLV 240
KQKNKKVKPS PDSALSPFSP CPSHKMECFL NGLWRLQPRV MVVTEQESNV NGSSLRERVS 300
KALNFYSTLF DCLEASTSRT WVGRSLLEKM LLGEEIKNIV ACEGVERKER HEKLETWIPR 360
LELAGFGRVP ISSNGIWLAT KLLQSYVPSY HIHHKNKFLF ICWEKIPLFS ISAWKF*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
