PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G038200.1
Common NamePHAVU_011G038200g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 562aa    MW: 61360.7 Da    PI: 6.9463
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G038200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.6e-11409467563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +a l++++
  Phvul.011G038200.1 409 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTNQN 467
                         9*************************************************999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-18405469IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909407470IPR004827Basic-leucine zipper domain
PfamPF001701.8E-9409467IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-11409466No hitNo description
SuperFamilySSF579593.59E-11409460No hitNo description
CDDcd147034.62E-25410461No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    Send to blast
MGENEEATND MMQRLHCSSF LKQPLNMEQL SIPQFNPSQM RARHQHQHQH QFDGGNSNKR  60
AGIPPSHPHQ IPPISPYSQI PVTRQQQMGS HNISPTPTHT RSLSQPSFFS LDSLPPLSPS  120
PFRDSSSTSV SEAADVSMED RDVTSHSLLP PSPFARTLNT STNSNLPLPP RKAHRRSNSD  180
IPFGFSTVLQ SSPPLIPLRG RENPVLAKPA QLVKRETPWD RGVDHSNVEG SGEKKSPEGE  240
VVDDLFSAYM NLDSFDALNS SGTDDKNGTE NRDDLDSRAS GTKTNGGDSS DNEAESSVNE  300
SGDGAVRQGG SEKREGMKRS AGGEIAPTTR HYRSVSMDSF ISKLNFGDES PKLPPSPGPR  360
TGLISPAGGV DGNSSAFSLE FGNGEFSGPE LKKIMANEKL AEIALTDPKR AKRILANRQS  420
AARSKERKMR YISELEHKVQ TLQTEATTLS AQLTLLQRDS AGLTNQNSEL KFRLQSMEQQ  480
AKLRDALNEA LTAEVQRLKI ATAELSGDSH GSSCLIPQHS VNPLMFQQQQ PPTASQQNIH  540
LQQQQQHHQN GNGNSNSDIK Q*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G038200.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150390.0AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007131742.10.0hypothetical protein PHAVU_011G038200g
TrEMBLV7AI260.0V7AI26_PHAVU; Uncharacterized protein
STRINGXP_007131742.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-128bZIP family protein