PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G047100.1
Common NamePHAVU_011G047100g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 189aa    MW: 21117.4 Da    PI: 6.0661
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G047100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.12.1e-0990150363
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e k +rr+q+ + +A+rsR++ k e e+L   + +L+ eN  L+kel  l +e++kl+ ++
  Phvul.011G047100.1  90 EAKEQRRRQSKKKSAKRSRLKMKVERERLNASIRNLDVENAGLRKELRDLIDEYDKLTGNN 150
                         789*****************************************************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.4E-782146No hitNo description
SMARTSM003380.002988152IPR004827Basic-leucine zipper domain
PfamPF001701.5E-790150IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.71490153IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEMNKSSKRP KVKIIKLKDI SSIKQTQFSM TAGNGGGANN VTSIENCNSI QDKTNIASDH  60
FEANPTEGNR ILSTNLSATN PQLAKEESDE AKEQRRRQSK KKSAKRSRLK MKVERERLNA  120
SIRNLDVENA GLRKELRDLI DEYDKLTGNN DSLMDELNEM FGQETVMDVF NMQSADSDAD  180
DNQNSNAT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G047100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150398e-58AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007131855.11e-135hypothetical protein PHAVU_011G047100g
TrEMBLV7AEA41e-133V7AEA4_PHAVU; Uncharacterized protein
STRINGXP_007131855.11e-134(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3600722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.26e-07G-box binding factor 1