PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G101200.1
Common NamePHAVU_011G101200g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 145aa    MW: 16745.8 Da    PI: 10.4485
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G101200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.21.3e-0628711460
                        HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                        R +A rs +RK+a ++ Le  vk L +eN+ L    ++l++ +++ +
  Phvul.011G101200.1 28 RQSAIRSIRRKQAHLADLEWQVKRLRQENSHLF---NQLNDASQQFR 71
                        99****************************999...66665555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-51379IPR004827Basic-leucine zipper domain
CDDcd147027.40E-172071No hitNo description
Gene3DG3DSA:1.20.5.1700.0012455No hitNo description
SuperFamilySSF579593.37E-62869No hitNo description
Gene3DG3DSA:1.20.5.105.2E-45685No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
HQSILFNNNY ERSTTVETTH LKRKNFIRQS AIRSIRRKQA HLADLEWQVK RLRQENSHLF  60
NQLNDASQQF RDANTNNRVL KSDVEALITE VKLVEEMVRR GTITPFNNQI LPSQTQLSTG  120
SVLNTNMSTQ TSCWNYAFYM GVSS*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G101200.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007132519.11e-103hypothetical protein PHAVU_011G101200g, partial
SwissprotQ9FUD39e-27BZIP9_ARATH; Basic leucine zipper 9
TrEMBLV7AI121e-102V7AI12_PHAVU; Uncharacterized protein (Fragment)
STRINGXP_007132519.11e-103(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.14e-29basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]