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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Potri.001G061200.3 |
| Common Name | POPTR_0001s13380g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
NAC |
| Protein Properties |
Length: 147aa MW: 16594.6 Da PI: 8.3215 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Potri.001G061200.3 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 36.8 | 1.2e-11 | 1 | 27 | 102 | 128 |
NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
+kktLvfy+g+ p+g++tdW+mheyrl
Potri.001G061200.3 1 MKKTLVFYRGKPPHGTRTDWIMHEYRL 27
8************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 147 aa
Download sequence Send
to blast |
MKKTLVFYRG KPPHGTRTDW IMHEYRLAST ETTACNTLKN KNSTQGPVVV PMENWVLCRI 60
FLKKRGTKNE EENIQVGNDN RLPKLRATEP VFYDFMTKEK TTDLNLAPSS SSSGSSGITE 120
EVSCNESDDH EESSSCNSFP YVRRKP*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Up-regulated during xylem vessel element differentiation. {ECO:0000269|PubMed:20388856}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in xylem and phloem cells in roots and inflorescence stems (PubMed:20388856). Highly expressed in senescent leaves. Expressed in roots, and abscission and dehiscence tissues, such as axils of bracts and abscission zones in cauline leaves and siliques (PubMed:21673078). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HM003690 | 0.0 | HM003690.1 Passiflora morifolia NAC-like protein 1 (NAC1) mRNA, complete cds. |
| GenBank | KP770012 | 0.0 | KP770012.1 Populus tomentosa apical meristem (NAM) family protein (Potri.001G061200) mRNA, complete cds. |
