PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Potri.001G077900.2

Common Name

POPTR_0001s15030g

Organism

Populus trichocarpa

Taxonomic ID

3694

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 249aa MW: 28356.2 Da PI: 9.2784

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Potri.001G077900.2	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.6	2.3e-07	102	148	16	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 16 AArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 + ++R++Kk+e++ L++kv++L + N+ L ke+ lkke +++++ Potri.001G077900.2 102 SDLKYREKKKQETKDLKRKVDVLMERNDHLEKENAYLKKEGDRMEKA 148 5569***********************************99988775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57959	8.84E-5	104	149	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.7E-6	105	151	No hit	No description
CDD	cd14686	3.12E-5	105	141	No hit	No description
Pfam	PF07716	1.1E-4	105	141	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence Send to blast
MDSDMYCFGF SDAEITPPSM NPLFRSQVAV PGIGENMYGI GTGSHELKYG LADHQRHQQQ 60 TEIPNQWMVN MNMSVNHQAA LEQPAGSSRS SKDPKKLARQ RSDLKYREKK KQETKDLKRK 120 VDVLMERNDH LEKENAYLKK EGDRMEKALK QGKRDVHQLK GKHDGLSTTV TEISRALAES 180 KYNMEIQREN ERLKCKINLL AKQMKNPDSL DTIKLQARIA QLEGENSARQ LVIDALCAKM 240 KKDTDDEP*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Potri.001G077900.2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002299400.2	0.0	uncharacterized protein LOC7477791 isoform X1
Refseq	XP_024465419.1	0.0	uncharacterized protein LOC7477791 isoform X1
TrEMBL	A0A2K2BU37	0.0	A0A2K2BU37_POPTR; Uncharacterized protein
STRING	POPTR_0001s15030.1	1e-173	(Populus trichocarpa)

Link Out ? help Back to Top
Phytozome	Potri.001G077900.2
Entrez Gene	7477791