PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.001G371300.1
Common NamePOPTR_0001s38020g
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 270aa    MW: 29526.6 Da    PI: 10.8269
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.001G371300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.6e-10199242447
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                         +k + r++kNRe+A rsR+RK+a  ++ + +  eL++eN+ Lk 
  Potri.001G371300.1 199 DKIQHRMIKNRESAARSRARKQALEAQQQVENTELKKENDLLKR 242
                         7899***********************************76664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-4196253IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-7198247No hitNo description
PROSITE profilePS502178.634198247IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-9198247No hitNo description
CDDcd147073.42E-16200254No hitNo description
PfamPF077169.4E-8201244IPR004827Basic-leucine zipper domain
PROSITE patternPS000360204218IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MLPPSQEDEL KASHFTALSL STDIQVSQQI HIPSQVAKKV QSTSLPYTRN SASPMKVKRK  60
RCVDGAALTI GTGSSSNLLK MKGVDHPTEQ VSCASLGGDY SRKQPPPIAA VSGLVNTSEA  120
RVVDEASPYH QFVRGVRSGN ANKKNDDRRA GTDSTSYVNA LNRACLYQQS ASGISCENDS  180
KKNAHPRARR TCGKTSISDK IQHRMIKNRE SAARSRARKQ ALEAQQQVEN TELKKENDLL  240
KRAVRFLLAI LRTKRMKLPA LSRSFSAPL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.001G371300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB9GG080.0B9GG08_POPTR; Uncharacterized protein
STRINGPOPTR_0001s38020.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1882266
Representative plantOGRP1939522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.15e-11abscisic acid responsive elements-binding factor 2