PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.002G045800.3
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 485aa    MW: 52512.6 Da    PI: 6.0257
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.002G045800.3genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.78e-16257311458
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                         +kr+rr+q+NRe+ArrsR+RK+a++ eLe+ v +L  e+++L ++    +++++ 
  Potri.002G045800.3 257 VKRARRMQSNRESARRSRRRKQAQLNELETQVGQLRDERTSLLSRFTDVNQKCDD 311
                         69*******************************************9999999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-15254318IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.645256308IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-9257310No hitNo description
SuperFamilySSF579595.47E-10257307No hitNo description
PfamPF001701.3E-12257310IPR004827Basic-leucine zipper domain
PROSITE patternPS000360261276IPR004827Basic-leucine zipper domain
PfamPF124981.0E-39325457IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MNSVFSVDDF SDPFWLSPPP PPSSTDPKMN RSESEWAFEN FLQEMASVPS SASETHTAAP  60
SVLSQSSTSS IPPDNGEDEV VEITKHPIHH HHQHPIPNPH PIPNPHPQPL DRNLTAPIDS  120
EEYRALLKSK LDLACAAVAM SMETNAVKPE VFSSLPEDQR LAARNMSLGT QSFHNGTDQG  180
ISMAQSGADD DESLGIPALP TTQRKSDGGS LGIPALPITQ RKQEVQARQT TSGSSSSDDD  240
DLEGDTGTNE NMDPAVVKRA RRMQSNRESA RRSRRRKQAQ LNELETQVGQ LRDERTSLLS  300
RFTDVNQKCD DAAVDNRILK ADIETLRAKV KMAEEQVKRV TGLNPVLLAR SSMPSPGMPF  360
VGGQVDASTN VAIPMQTNPH QFFHQPVQGI TPAPPHLQRL NNSFPKRTLV PLATNPQTDN  420
GNSNDGGMAV MPSMQLTADG QSLPAMPSMQ QVQKQIGPTV GPAGTLPACD SGLPHVVAKD  480
YKKK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1270277RRSRRRKQ
2272277SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.002G045800.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002300809.30.0light-inducible protein CPRF2
TrEMBLA0A2K2BDD90.0A0A2K2BDD9_POPTR; BZIP family protein
STRINGPOPTR_0005s23900.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.15e-44basic leucine zipper 25