PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.002G090800.1
Common NamePOPTR_0002s09140g
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 322aa    MW: 36278.6 Da    PI: 6.0629
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.002G090800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.5e-10250294549
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                         +r+ r++kNRe+A rsR++K+a++ +Le  v    + N +Lkke 
  Potri.002G090800.1 250 RRQNRMIKNRESAARSRAKKQAYTSQLEHAVFHSRKTNNRLKKEK 294
                         699***************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.0E-6246315IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.829248293IPR004827Basic-leucine zipper domain
CDDcd147072.34E-17250296No hitNo description
SuperFamilySSF579591.37E-8250295No hitNo description
Gene3DG3DSA:1.20.5.1704.1E-11250295No hitNo description
PfamPF001708.0E-8250294IPR004827Basic-leucine zipper domain
PROSITE patternPS000360254268IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MDNNRPLVPS NGAQGPQFPS LPGQESLYNL TFDEVNDQIG NVRKPLNAVN VDELRNVISV  60
EESQLLQNPP SSSSSSSSSS TFLFLGNYNL NGTSSRKTID DMWKEIANEE HVNVFDNQIV  120
RQQLGETTLE DFLVRAGVIN KGNQNEVFSH QPIMEVDPMV VGSQQTDLLP FQMASVQQQQ  180
QQQMTLLDSN FHMFEAVSDQ NPVVDVGYSD NRLPMPMPVS AMSATSSDSR VAAEKQCRYT  240
DEMMKKTIER RQNRMIKNRE SAARSRAKKQ AYTSQLEHAV FHSRKTNNRL KKEKELEIIF  300
LSSDQAPVPR FQLRRTSSAS F*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.002G090800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002301024.20.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A2K2BFX30.0A0A2K2BFX3_POPTR; Uncharacterized protein
STRINGPOPTR_0002s09140.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Representative plantOGRP1630733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.16e-40ABA-responsive element binding protein 3