PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Potri.003G220000.1

Organism

Populus trichocarpa

Taxonomic ID

3694

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 141aa MW: 16671.4 Da PI: 10.0731

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Potri.003G220000.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.1	6.8e-07	3	64	2	63
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 k+ k + kqk Re rr+Rq+Kk+ + e + k + eN+ Lk+++++l++e+ +l++++ Potri.003G220000.1 3 KPEKTGMQKQKKREIDRRYRQKKKKAVVETKIKLAMTMIENENLKSTVQKLEQEIIQLTKQL 64 566778899*************************************************9985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.8E-6	5	67	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence Send to blast
MQKPEKTGMQ KQKKREIDRR YRQKKKKAVV ETKIKLAMTM IENENLKSTV QKLEQEIIQL 60 TKQLNSIEPR PDQTTYDELQ QKIKYLRVEN EVTKCLLKDT DASYISNMIK VLKENEDMKR 120 TIEHYERLSS HAGCLKKLET *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	12	26	KKREIDRRYRQKKKK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Potri.003G220000.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002299106.1	1e-27	uncharacterized protein LOC7457698
TrEMBL	A0A2K2BAV5	3e-95	A0A2K2BAV5_POPTR; Uncharacterized protein
STRING	POPTR_0003s21110.1	6e-88	(Populus trichocarpa)

Link Out ? help Back to Top
Phytozome	Potri.003G220000.1