PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.006G114600.2
Common NamePOPTR_0006s11550g
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 485aa    MW: 53245 Da    PI: 8.5923
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.006G114600.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.41.6e-08125187163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         eke +r rr   NRe+Ar   +R++a +eeL++k++ L+ eN+ Lkke e   k++++l++ +
  Potri.006G114600.2 125 EKEERRLRRILANRESARQTIRRRQALCEELTRKAADLSWENENLKKEKELALKNYQSLETTN 187
                         78999****************************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.7E-5123185No hitNo description
PfamPF001701.5E-7125187IPR004827Basic-leucine zipper domain
SMARTSM003382.8E-11125189IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.461127190IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.77E-5129184No hitNo description
CDDcd147025.43E-14130181No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MDLDLERCSV SSSGSSSAAD RMELEAAEAL ADLAHLAMRE SSGSEWGSKG KRARKRVRAE  60
SDSVSTYSDL PRDRAVVDQQ PIHSNVVKPA RQELDADVPK SSPSCATSYP SYGTGRSRLN  120
LTEAEKEERR LRRILANRES ARQTIRRRQA LCEELTRKAA DLSWENENLK KEKELALKNY  180
QSLETTNKHL KAQMAKQIKA EMEVSPGDLK SALVDIPTTA PTNCPLLVYN QHAFSPHCWP  240
SIIQSSNPIQ SHYTTENAIV IPSNMPMPTN GTHDSSQLQQ ENTVIVSGPR TPLYVVSCPW  300
FFPGPDHGNG LHAQPSFSFK HRQDGISLNN LCCGSSSPKA AAPMENRHSS LSIIVKSETT  360
SSEEVRVIND LNETPVGFTL YGGGQCEGTH PKEMILTPVP PTSVTPAVAV KNEAGQKSEH  420
AFGANGICTK ASQLRCVLPE KNQDPFKFPS KKLVDAASAA EARRRRKELT KLKNLHGRQC  480
RLNC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15258ARKRVRA
2462467RRRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.006G114600.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024458474.10.0uncharacterized protein LOC18100054 isoform X2
TrEMBLA0A2K2A0I50.0A0A2K2A0I5_POPTR; Uncharacterized protein
STRINGPOPTR_0006s11550.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.14e-48bZIP family protein