PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.006G277800.4
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 196aa    MW: 21598.2 Da    PI: 7.9546
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.006G277800.4genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.36.7e-13131161333
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                         ++kr rr+ +NRe+ArrsR+RK+a +  Le 
  Potri.006G277800.4 131 DIKRIRRMVSNRESARRSRKRKQAHLSDLEV 161
                         68*************************9984 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-5129194IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-9132185No hitNo description
PfamPF001701.9E-10132162IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-9133193No hitNo description
CDDcd147021.36E-12134162No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MEEQKAGGSD GMKKSESELA DFSAEIYGFF SDIFSGDLSS FPVNKTRDIV NGFSTCGGLT  60
ESCFLWSQNT NPKNSSVSVS TDAQSSLCVG SPMSANKPRV KDSQTRVAAS VSSPDQSDED  120
GLSEQSTNPH DIKRIRRMVS NRESARRSRK RKQAHLSDLE VQEKMHLYSS NFQMLPNNFV  180
LLKQIVVCLT QMLKL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145151RRSRKRK
2145152RRSRKRKQ
3147152SRKRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pth.110881e-131stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.006G277800.4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU2750601e-50GU275060.1 Populus balsamifera isolate GIL14 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750611e-50GU275061.1 Populus balsamifera isolate GIL14 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750621e-50GU275062.1 Populus balsamifera isolate HAY07 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750631e-50GU275063.1 Populus balsamifera isolate HAY07 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750641e-50GU275064.1 Populus balsamifera isolate INU03 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750651e-50GU275065.1 Populus balsamifera isolate INU03 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750661e-50GU275066.1 Populus balsamifera isolate KUU07 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750671e-50GU275067.1 Populus balsamifera isolate KUU07 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750681e-50GU275068.1 Populus balsamifera isolate LOV02 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750691e-50GU275069.1 Populus balsamifera isolate LOV02 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750701e-50GU275070.1 Populus balsamifera isolate MGR10 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750711e-50GU275071.1 Populus balsamifera isolate MGR10 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750721e-50GU275072.1 Populus balsamifera isolate NWL07 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750731e-50GU275073.1 Populus balsamifera isolate NWL07 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750741e-50GU275074.1 Populus balsamifera isolate POR11 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750751e-50GU275075.1 Populus balsamifera isolate POR11 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750761e-50GU275076.1 Populus balsamifera isolate RNA13 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750771e-50GU275077.1 Populus balsamifera isolate RNA13 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750781e-50GU275078.1 Populus balsamifera isolate WHR03 haplotype A G/HBF1-related bZIP protein gene, partial sequence.
GenBankGU2750791e-50GU275079.1 Populus balsamifera isolate WHR03 haplotype B G/HBF1-related bZIP protein gene, partial sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006382195.11e-115basic leucine zipper 9
TrEMBLU5GEY11e-113U5GEY1_POPTR; Uncharacterized protein
STRINGPOPTR_0006s29250.11e-114(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.12e-24basic leucine zipper 9