PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.007G006900.1
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 182aa    MW: 21223.3 Da    PI: 10.674
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.007G006900.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.2e-1180135560
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                         ++ rr+ +NRe+ArrsR RK++ +++L++ v  L  eN++L ++l     ++ +++
  Potri.007G006900.1  80 RKRRRMVSNRESARRSRMRKQKHMDNLRNQVNRLRVENRELTNRLRIVLYHCHSVR 135
                         6778999**********************************998876666666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-1073125No hitNo description
SMARTSM003382.0E-1376140IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.73778124IPR004827Basic-leucine zipper domain
PfamPF001703.8E-980137IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.02E-1180129No hitNo description
CDDcd147026.71E-2081132No hitNo description
PROSITE patternPS0003608398IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MSPLRCNSSV SSSFLPPSPL YRAISIAMLS TVSATYPLVE PMLDNPFQFF ENGFTPWDCF  60
DPFPSAPQSP KPFGSSSDER KRRRMVSNRE SARRSRMRKQ KHMDNLRNQV NRLRVENREL  120
TNRLRIVLYH CHSVRTENDW LRSEYSMLRK KLSETSQILM MRQLQQFTSA WPCNNIISAT  180
E*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17983RKRRR
279100RKRRRMVSNRESARRSRMRKQK
39299RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pth.104182e-99bud
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.007G006900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024461072.11e-125basic leucine zipper 43
TrEMBLA0A3N7G0T91e-123A0A3N7G0T9_POPTR; Uncharacterized protein
STRINGPOPTR_0007s14740.11e-111(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Representative plantOGRP8744815
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.11e-33basic leucine-zipper 5