PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.009G075000.1
Common NamePOPTR_0009s07880g
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 253aa    MW: 28326.6 Da    PI: 10.4891
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.009G075000.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1408.4e-13166224563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         k+ +r  +NR++A++sR++++++++  e+kvk+Le+e   L  ++ +++ + ++lk+e 
  Potri.009G075000.1 166 KKLKRVLSNRVSAQKSRLKRLQYLADIERKVKALEEEIAVLSPRVAQYRSHHQALKMEQ 224
                         899*****************************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-11159221No hitNo description
SMARTSM003386.0E-12162226IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.99164227IPR004827Basic-leucine zipper domain
PfamPF001701.8E-11166224IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.39E-10166221No hitNo description
CDDcd147031.61E-16167218No hitNo description
PROSITE patternPS000360169184IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MESKVIYEIG KPHASSQTIY MLHSFKDWKY YNIMEAMKRS SSPGLPPWPK RALELTSFSA  60
MPQSIHPLAR SSFQGLKKPY SMDSSVTKSP FNPSDAMTIS SSSADTNNKE SQNLSFPFDN  120
KNSTTKDLAT DPAIPSSGDK PVKTRAMISG VQIRAARAID PNMDPKKLKR VLSNRVSAQK  180
SRLKRLQYLA DIERKVKALE EEIAVLSPRV AQYRSHHQAL KMEQKMLNME ISAQTSNKML  240
KDGNQLTLPA YM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.009G075000.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2103420.0AC210342.1 Populus trichocarpa clone POP091-B06, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB9HNC10.0B9HNC1_POPTR; Uncharacterized protein
STRINGPOPTR_0009s07880.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148181113
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.27e-19bZIP family protein