PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.009G164500.2
Common NamePOPTR_0009s16610g
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 329aa    MW: 36699.1 Da    PI: 5.2924
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.009G164500.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.5e-14271323557
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                         +r+rr++kNRe+A rsR+RK+a++ eLe +  +L++eN +Lk+ +ee++++ +
  Potri.009G164500.2 271 RRQRRMIKNRESAARSRARKQAYTVELELELNQLKEENAKLKQIVEEIEEKRK 323
                         69*******************************************99999765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-10267328IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.404269321IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-10271320No hitNo description
PfamPF001709.8E-13271323IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-13271323No hitNo description
CDDcd147072.44E-24271312No hitNo description
PROSITE patternPS000360274289IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MQGMVSENIA YGNAIQESPV LQPQDHQDQT LKDTPFSPLD GQSSLLSLTL NEIQLKRGKS  60
FGSMNMDEFF VNLWNSDDNQ VPSQPNQNVR PDNDHGGVTK QCPNLARQGS FSLPAPLCKK  120
TVDEVLFEIQ NEEPQQHNPN SIGADHEPPQ RQQTLGEITL EDFLIKAGVV QEAPAGSSQH  180
KKATPIQDRN NACLDMNFGM GHMMGLGYQN LSAGNGFAAY QMFPQGKLGY NVGEVVPNNA  240
KNEKCQSIME LGAQSSKKRM NDGPPEVVVE RRQRRMIKNR ESAARSRARK QAYTVELELE  300
LNQLKEENAK LKQIVEEIEE KRKEEVQL*
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression during seed development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.009G164500.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002312814.20.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
RefseqXP_024464309.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
SwissprotQ8RYD61e-66AI5L1_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLA0A3N7FJH50.0A0A3N7FJH5_POPTR; Uncharacterized protein
STRINGPOPTR_0009s16610.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.12e-45bZIP family protein