PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.011G071800.3
Common NamePOPTR_0011s06800g
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family BES1
Protein Properties Length: 255aa    MW: 26381.9 Da    PI: 4.923
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.011G071800.3genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82226.71.8e-0816979149
              DUF822  79 aeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149
                         ++++g sasasp+ss++        +sp++sy++sp+sssfpsp+s+  + + +       +sl+p+l++ls+ sss
  Potri.011G071800.3   1 MDIIGGSASASPCSSYH--------QSPCASYNPSPASSSFPSPVSSRYAANGNGnvdadaNSLIPWLRNLSSGSSS 69 
                         578999*********99........9******************998877665557889999*********997776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.9E-10264IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MDIIGGSASA SPCSSYHQSP CASYNPSPAS SSFPSPVSSR YAANGNGNVD ADANSLIPWL  60
RNLSSGSSSA SPKHPNHLFI HTGSISAPVT PPLSSPTART PRTRNDWDDP AAGQSWMGQN  120
YSFLPSSMPS STPPSPGRQV LPDSGWLAGI QIPQSGPSSP TFSLVSRNPF GFKEEALSGA  180
GSRMWTPGQS GTCSPAVPAG IDQTADVPMA DSMAAEFAFG SNTAGLVKPW EGERIHEECV  240
SDDLELTLGN SSTR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.011G071800.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU8236030.0EU823603.1 Populus tremula isolate swl195-31 brassinosteroid signaling positive regulator-related protein gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024467344.10.0BES1/BZR1 homolog protein 4 isoform X1
RefseqXP_024467345.10.0BES1/BZR1 homolog protein 4 isoform X2
SwissprotQ9ZV884e-96BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2K1YGT60.0A0A2K1YGT6_POPTR; Uncharacterized protein
STRINGPOPTR_0011s06800.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.13e-75BES1/BZR1 homolog 4