PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.014G007100.1
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 230aa    MW: 26174.6 Da    PI: 10.2895
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.014G007100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.11.2e-10116160549
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                         ++ rr+ +NRe+ArrsR RK++ +e+L++ v  L  eN++L ++l
  Potri.014G007100.1 116 RKRRRMVSNRESARRSRMRKQKHVENLRNQVNRLRIENRELTNRL 160
                         5779999********************************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-11112183IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-10113160No hitNo description
PROSITE profilePS5021710.714114160IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.53E-10116163No hitNo description
PfamPF001701.7E-8116160IPR004827Basic-leucine zipper domain
CDDcd147028.31E-20117164No hitNo description
PROSITE patternPS000360119134IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MNSAHKYEPP MMQFFPFLLL LPSPIYLAIS VAMLSTVSAI FPSVEPMASN PFQSFENGFT  60
PWDCFDPFSS SPQSPKPVGS SSGSDKSNQA GQNPDNSNSN SGSDDPNPQA SLIDERKRRR  120
MVSNRESARR SRMRKQKHVE NLRNQVNRLR IENRELTNRL RFVLYHSHGV RTDYDRLRSE  180
YSTLRKKLSD IRQILMMRQL QELTSAWPCN NMITTTTTTE QIAPSLITS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115119RKRRR
2115136RKRRRMVSNRESARRSRMRKQK
3128135RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pth.104180.0bud
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.014G007100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011007850.11e-158PREDICTED: basic leucine zipper 43-like
TrEMBLA0A3N7HH081e-132A0A3N7HH08_POPTR; Uncharacterized protein
STRINGPOPTR_0007s14740.16e-82(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Representative plantOGRP8744815
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.19e-36basic leucine-zipper 5