PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.019G091900.2
Common NamePOPTR_0019s12170g
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 309aa    MW: 34666.6 Da    PI: 6.8997
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.019G091900.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.2e-10178220547
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                         +r +r   NR +A+rsR RK+++i eLe+ v +L++e + L  
  Potri.019G091900.2 178 RRVKRILANRQSAQRSRVRKLQYISELERCVTSLQGEVSVLSP 220
                         57799999***************************99877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-13174238IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.151176225IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-10178227No hitNo description
PfamPF001707.4E-9178222IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.06E-10178228No hitNo description
CDDcd147035.00E-22179229No hitNo description
PROSITE patternPS000360181196IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MAQLPPKIPN VTPSWPDFSH KKLPITGIME TSPPRDDIIT AIVTNPSWVD EFLGFSSTRR  60
GTHRRSVSDS IAFREEAPTI STDFDKFDDE QLMSMFNDDI SNAVAAPNSS STPSSPSDHN  120
SINDEKEAIV VASKHKQQQK VRNENDEGQS PSEWETPTTV PTATDPAATS NERKIDPRRV  180
KRILANRQSA QRSRVRKLQY ISELERCVTS LQGEVSVLSP RVAYLDHRRL LLNVDNSALK  240
QRIAALAQDK IFKDAHQEAL KREIERLRQV YHQQNLKMEN TSPPSASSTP SNDPTTPTTD  300
KEQQLFQV*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.019G091900.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024446890.10.0basic leucine zipper 61
SwissprotQ9M2K41e-105BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2K1WRW40.0A0A2K1WRW4_POPTR; Uncharacterized protein
STRINGPOPTR_0019s12170.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.21e-96bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]