PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c14_24440V3.2.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 139aa    MW: 15888.2 Da    PI: 11.4024
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c14_24440V3.2.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.8e-10106137637
                         HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvke 37 
                         r++r+++NRe ArrsR+RK++ ++eL+  +  
  Pp3c14_24440V3.2.p 106 RQKRMISNRELARRSRLRKQQHLDELRSQISH 137
                         89************************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.5E-7103137No hitNo description
PROSITE profilePS502178.68103138IPR004827Basic-leucine zipper domain
CDDcd147027.66E-13106138No hitNo description
PfamPF001704.5E-7106137IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.7E-7106137No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MLAIGLRFRR PSPLFVGGGR RVFWKRRILH RPCFIPTTPC DCAGARLGLN LNQSELSGLS  60
RHSCEEISKK VHDNGGETHS SPRNKEPKVQ SNHTFDDDQL VISEGRQKRM ISNRELARRS  120
RLRKQQHLDE LRSQISHL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123RRSRLRK
2117124RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.110611e-103gametophore| protonema
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024392804.17e-48basic leucine zipper 63-like
RefseqXP_024392805.17e-48basic leucine zipper 63-like
RefseqXP_024392806.17e-48basic leucine zipper 63-like
RefseqXP_024392808.17e-48basic leucine zipper 63-like
TrEMBLA9SE267e-80A9SE26_PHYPA; Predicted protein
STRINGPP1S69_141V6.11e-80(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15830.14e-12basic leucine-zipper 3