PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c15_5820V3.1.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 229aa    MW: 26284.5 Da    PI: 6.5063
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c15_5820V3.1.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.61e-16115173563
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        +r++r+++NRe+ArrsR+RK++ ++eL+  +++L aeN+ + ++ +  ++++a+l+ e+
  Pp3c15_5820V3.1.p 115 RRQKRMISNRESARRSRLRKQQHLDELRSQIAQLRAENTHMLNRFSLASQQYAQLTEEN 173
                        79*****************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-16111175IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.151113176IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-12115169No hitNo description
PfamPF001709.2E-13115173IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.4E-12115170No hitNo description
CDDcd147021.88E-21116167No hitNo description
PROSITE patternPS000360118133IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MTFLRLWVDW MCSHWGWGWG VNEEREVMLR CSAHVRFQAM FEVEQLRSLL LAVLCAGPNL  60
ALDVNHLDIS GLSRDYYEGE RHDIGGDTSF SPRVNNLEGQ SNFTSDDDQV VVDERRQKRM  120
ISNRESARRS RLRKQQHLDE LRSQIAQLRA ENTHMLNRFS LASQQYAQLT EENCVLRSNA  180
TDMRHQLQML HHAASSHQPL SLERGLGTVQ PLPLNLSLCS GLTEDANW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127133RRSRLRK
2127134RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.7270.0gametophore| protonema
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00267DAPTransfer from AT2G18160Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024396092.11e-168bZIP transcription factor 44-like isoform X2
TrEMBLA0A2K1JC481e-167A0A2K1JC48_PHYPA; Uncharacterized protein
STRINGPP1S158_113V6.12e-75(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.16e-20basic leucine-zipper 44