PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c15_5820V3.2.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 251aa    MW: 27553.6 Da    PI: 5.8537
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c15_5820V3.2.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.41.1e-16137195563
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        +r++r+++NRe+ArrsR+RK++ ++eL+  +++L aeN+ + ++ +  ++++a+l+ e+
  Pp3c15_5820V3.2.p 137 RRQKRMISNRESARRSRLRKQQHLDELRSQIAQLRAENTHMLNRFSLASQQYAQLTEEN 195
                        79*****************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-16133197IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.151135198IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.3E-12137193No hitNo description
PfamPF001709.6E-13137195IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.64E-12137191No hitNo description
CDDcd147021.08E-21138189No hitNo description
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MGAMEMTGAE EKMQGEVGTM SRAAPVDDLF APMGRLDVQS LGVGLGSERG EGGNASLFSS  60
CAISSNVRSR TAEKSPTSGP NLALDVNHLD ISGLSRDYYE GERHDIGGDT SFSPRVNNLE  120
GQSNFTSDDD QVVVDERRQK RMISNRESAR RSRLRKQQHL DELRSQIAQL RAENTHMLNR  180
FSLASQQYAQ LTEENCVLRS NATDMRHQLQ MLHHAASSHQ PLSLERGLGT VQPLPLNLSL  240
CSGLTEDANW *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149155RRSRLRK
2149156RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.7270.0gametophore| protonema
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00267DAPTransfer from AT2G18160Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024396091.10.0bZIP transcription factor 44-like isoform X1
TrEMBLA0A2K1JC481e-122A0A2K1JC48_PHYPA; Uncharacterized protein
STRINGPP1S158_113V6.11e-102(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5511678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.16e-20basic leucine-zipper 44