PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c15_7040V3.2.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 433aa    MW: 48028.9 Da    PI: 6.5218
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c15_7040V3.2.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.71.8e-16252305356
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                        +lkr +r+ +NRe+ArrsR++K+a +  Le+ v++L aeN++L ++l+e++ + 
  Pp3c15_7040V3.2.p 252 DLKRVKRMLSNRESARRSRRKKQAHLSDLETQVAQLRAENSTLLQRLQEITYMH 305
                        69******************************************9999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.0E-16250314IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-12250301No hitNo description
PROSITE profilePS5021711.312252302IPR004827Basic-leucine zipper domain
PfamPF001705.3E-15253302IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.2E-11254301No hitNo description
CDDcd147026.55E-19255302No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MDRTSSIDNF LSTFWGESSA ATLVKSGMDR SAYEFSFQEF SKENTIAASC GGNCPKNRFQ  60
KSQSNEMRDH DEQSSYNLQM SGRFSSEFTP FMLASAEDLL PMNNALNSVE VDDAVVIEDA  120
LNPMFSVIQD DAERIYSTFS TGAASVGDSS SQEYEVFLQQ KLAMACAAAA LSRVSGEGGR  180
NEGTSRTKFA IELSATSTLA SKVRCARVDV KPSSPKPEVD ASTWKLKLTT SGSELSDDEE  240
HDMLNENLSR GDLKRVKRML SNRESARRSR RKKQAHLSDL ETQVAQLRAE NSTLLQRLQE  300
ITYMHKDASV DNRILKADVE ALRAKVKMTE GMVAQQGQPM VNFIPDSNLS FISPIMISER  360
PLPQQMRHSS MMRYDQQQQH PCSIGGKIWR SPSMQRIAGL EHMRVRNGSS CNTAAWGGWE  420
MDKPAIVQGH GI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024396641.10.0basic leucine zipper 63-like
TrEMBLA0A2K1JCB80.0A0A2K1JCB8_PHYPA; Uncharacterized protein
STRINGPP1S189_104V6.20.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.17e-33bZIP family protein