PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c1_33070V3.2.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 400aa    MW: 43941.2 Da    PI: 6.9679
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c1_33070V3.2.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.52.8e-13278322549
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                        kr +r+ +NR +A+rsRqR+++++++Le   ++L  eN++L+k+l
  Pp3c1_33070V3.2.p 278 KRKKRMLSNRASAQRSRQRRQERLDQLEVLTAQLRVENSTLQKKL 322
                        9*****************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.1E-13274338IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841276322IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.87E-9278325No hitNo description
Gene3DG3DSA:1.20.5.1706.4E-10278322No hitNo description
PfamPF001701.6E-11278322IPR004827Basic-leucine zipper domain
PROSITE patternPS000360281296IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MESASRNLVN FSYGGPPRMY RLDPTLIPQH SPLAQPRMLS ELPEAANRLD LTSAIAHELQ  60
RINSQPGWLP WNQQLGEIQC SHEPANGLQL PPDSLLSHQN AGSAGRPIPQ YIPRFDEALR  120
PPAQQLPTRL DLYSPDLEPL ASAHQGFYSR ADNGVPRDVG AHQRTRLHPG HQALDAGGRV  180
ESMARSVSPW IERMMQADVT PTPSPSLGIS TSLSLSQRGL GEASCVASQT AELQSCHSSD  240
VQRSAFQCGV QRDQSTAEAS AELCTDDEDW EARPLDEKRK KRMLSNRASA QRSRQRRQER  300
LDQLEVLTAQ LRVENSTLQK KLGVAVQVAK KFEDENKALQ RRVERLSKEL ESGKARMPTE  360
RAFDECASSQ QTTCTSSCEM VGSECWCVIG RGSGGAGCG*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.147010.0gametophore| sporophyte
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024377664.10.0uncharacterized protein LOC112283324 isoform X2
TrEMBLA0A2K1LAQ60.0A0A2K1LAQ6_PHYPA; Uncharacterized protein
STRINGPP1S355_24V6.10.0(Physcomitrella patens)