PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c20_1120V3.4.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family BES1
Protein Properties Length: 409aa    MW: 43991.7 Da    PI: 7.7834
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c20_1120V3.4.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822175.42.8e-5452149197
             DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspe 91 
                        ++++r ptwkErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc eAGw+ve+DGttyrkgskp+ + +e+  s ++asp+
  Pp3c20_1120V3.4.p  52 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRLYGNYKLPKHCDNNEVLKALCVEAGWTVEEDGTTYRKGSKPPaQPMEVCTSPSEASPT 143
                        5899************************************************************************99999999999***** PP

             DUF822  92 sslqss 97 
                        ss+  +
  Pp3c20_1120V3.4.p 144 SSYPGA 149
                        **9833 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.0E-5253175IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    Send to blast
MTMKAQGNCD DFVYCSFCFV GFLCCFCYCC WFWFFWFFFF FFACNLQIGD MTSGTRLPTW  60
KERENNKRRE RRRRAIAAKI FAGLRLYGNY KLPKHCDNNE VLKALCVEAG WTVEEDGTTY  120
RKGSKPPAQP MEVCTSPSEA SPTSSYPGAA EGTSLIPWLK GLSSNGGSGT ATPSSSAGLP  180
PLHVMHGGSS SAPVTPPLSS PTHRGPPVKP DWDHIKDADH HSHGFPPSGP PTWNHHPFLA  240
AAAAAAQAAA SNQSHLRPGY CDTPDGARTP IEEAESEISP GTALEFATVC GSNSSKWANG  300
VRVRTSSGGR LLGGMAGLGP FPSANNDSPL ETFSHAWRNP MQKSISMPVS PVSSRMKGSF  360
GDRLGRCPSE LELSGAVQGL GSLWELDGVV PEVGAKRKLP ADDLELKL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A9e-2256126372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B9e-2256126372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C9e-2256126372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D9e-2256126372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.55700.0gametophore| protonema
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024357987.10.0BES1/BZR1 homolog protein 4-like
TrEMBLA9TVD00.0A9TVD0_PHYPA; Predicted protein
STRINGPP1S335_68V6.10.0(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP15951542
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-40BES1/BZR1 homolog 4