PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c23_19420V3.4.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 451aa    MW: 47233.8 Da    PI: 9.8593
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c23_19420V3.4.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.32.2e-15368414551
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                         +r+rr++kNRe+A rsR+RK+a++ eLe +v +L++eN++L+k  ee
  Pp3c23_19420V3.4.p 368 RRQRRMIKNRESAARSRARKQAYTVELEAEVSQLKEENMRLRKHQEE 414
                         79****************************************65444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-13364429IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.036366414IPR004827Basic-leucine zipper domain
PfamPF001703.8E-13368418IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.75E-10368413No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-13368414No hitNo description
CDDcd147071.94E-25368422No hitNo description
PROSITE patternPS000360371386IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MGANGASSSG VSNGLASSSL AGAGSRFNSL APQSPIYSLT LDEFQTALSE PAKNLGSMNM  60
DEFVKNIWSA VWTNDESQAM AEAMGPLGDA GQGSGELSRQ PSLQKQGSIS LPRTLSMKTV  120
DEVWNDIHRG LSEQSEAGGE PVGGGSEQER TKTFKKMTLE DFLVKAGVVM EDSEAATQGF  180
SSFMGGAGNQ EKSRIAHGGR AGEIVPTLSL SPANVMTSQA TIGSMQIDAY NKNQAAGTQQ  240
QQQQQADWLR SIAQQQAAAE AAYANVAAKR MGNGAGPMVG MGGLRMGGAI GPSMGPGMGG  300
AMTGGGLGLG LGGGMTANMG MGANSPPSPD SDGGRSGLSL SPIQYGADGS VRGRKRGSDG  360
AVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVSQ LKEENMRLRK HQEEEAERRR  420
KQITEILQSA TKVAGVEKAK GLRRTRTATW *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024363129.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X3
TrEMBLA0A2K1IK100.0A0A2K1IK10_PHYPA; Uncharacterized protein
STRINGPP1S49_161V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.21e-33abscisic acid responsive element-binding factor 1